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Last Name
Institution

Yongchao Ge

TitleASSISTANT PROFESSOR
InstitutionMount Sinai
DepartmentNeurology
Address

     Bibliographic 
     selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Pan JJ, Ge YS, Xu GL, Jia WD, Liu WF, Li JS, Liu WB. The expression of chitinase 3-like 1: a novel prognostic predictor for hepatocellular carcinoma. J Cancer Res Clin Oncol. 2013 Jun; 139(6):1043-54.
      View in: PubMed
    2. Barría MI, Garrido JL, Stein C, Scher E, Ge Y, Engel SM, Kraus TA, Banach D, Moran TM. Localized mucosal response to intranasal live attenuated influenza vaccine in adults. J Infect Dis. 2013 Jan 1; 207(1):115-24.
      View in: PubMed
    3. Nair VD, Ge Y, Balasubramaniyan N, Kim J, Okawa Y, Chikina M, Troyanskaya O, Sealfon SC. Involvement of histone demethylase LSD1 in short-time-scale gene expression changes during cell cycle progression in embryonic stem cells. Mol Cell Biol. 2012 Dec; 32(23):4861-76.
      View in: PubMed
    4. Mortillo S, Elste A, Ge Y, Patil SB, Hsiao K, Huntley GW, Davis RL, Benson DL. Compensatory redistribution of neuroligins and N-cadherin following deletion of synaptic ß1-integrin. J Comp Neurol. 2012 Jun 15; 520(9):2041-52.
      View in: PubMed
    5. Ge Y, Sealfon SC. flowPeaks: a fast unsupervised clustering for flow cytometry data via K-means and density peak finding. Bioinformatics. 2012 Aug 1; 28(15):2052-8.
      View in: PubMed
    6. Xin Y, Chanrion B, O'Donnell AH, Milekic M, Costa R, Ge Y, Haghighi FG. MethylomeDB: a database of DNA methylation profiles of the brain. Nucleic Acids Res. 2012 Jan; 40(Database issue):D1245-9.
      View in: PubMed
    7. Danias J, Gerometta R, Ge Y, Ren L, Panagis L, Mittag TW, Candia OA, Podos SM. Gene expression changes in steroid-induced IOP elevation in bovine trabecular meshwork. Invest Ophthalmol Vis Sci. 2011 Nov; 52(12):8636-45.
      View in: PubMed
    8. Xin Y, O'Donnell AH, Ge Y, Chanrion B, Milekic M, Rosoklija G, Stankov A, Arango V, Dwork AJ, Gingrich JA, Haghighi FG. Role of CpG context and content in evolutionary signatures of brain DNA methylation. Epigenetics. 2011 Nov; 6(11):1308-18.
      View in: PubMed
    9. Panagis L, Zhao X, Ge Y, Ren L, Mittag TW, Danias J. Retinal gene expression changes related to IOP exposure and axonal loss in DBA/2J mice. Invest Ophthalmol Vis Sci. 2011; 52(11):7807-16.
      View in: PubMed
    10. Xin Y, Ge Y, Haghighi FG. Methyl-Analyzer--whole genome DNA methylation profiling. Bioinformatics. 2011 Aug 15; 27(16):2296-7.
      View in: PubMed
    11. Ang YS, Tsai SY, Lee DF, Monk J, Su J, Ratnakumar K, Ding J, Ge Y, Darr H, Chang B, Wang J, Rendl M, Bernstein E, Schaniel C, Lemischka IR. Wdr5 mediates self-renewal and reprogramming via the embryonic stem cell core transcriptional network. Cell. 2011 Apr 15; 145(2):183-97.
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    12. Chen H, Jia WD, Li JS, Wang W, Xu GL, Ma JL, Ren WH, Ge YS, Yu JH, Liu WB, Zhang CH, Wang YC. Extracellular matrix protein 1, a novel prognostic factor, is associated with metastatic potential of hepatocellular carcinoma. Med Oncol. 2011 Dec; 28 Suppl 1:S318-25.
      View in: PubMed
    13. Zhang CH, Xu GL, Jia WD, Li JS, Ma JL, Ren WH, Ge YS, Yu JH, Liu WB, Wang W. Activation of STAT3 signal pathway correlates with twist and E-cadherin expression in hepatocellular carcinoma and their clinical significance. J Surg Res. 2012 May 1; 174(1):120-9.
      View in: PubMed
    14. Kraus TA, Sperling RS, Engel SM, Lo Y, Kellerman L, Singh T, Loubeau M, Ge Y, Garrido JL, Rodríguez-García M, Moran TM. Peripheral blood cytokine profiling during pregnancy and post-partum periods. Am J Reprod Immunol. 2010 Dec; 64(6):411-26.
      View in: PubMed
    15. Carvajal-Vergara X, Sevilla A, D'Souza SL, Ang YS, Schaniel C, Lee DF, Yang L, Kaplan AD, Adler ED, Rozov R, Ge Y, Cohen N, Edelmann LJ, Chang B, Waghray A, Su J, Pardo S, Lichtenbelt KD, Tartaglia M, Gelb BD, Lemischka IR. Patient-specific induced pluripotent stem-cell-derived models of LEOPARD syndrome. Nature. 2010 Jun 10; 465(7299):808-12.
      View in: PubMed
    16. Nudelman G, Ge Y, Hu J, Kumar M, Seto J, Duke JL, Kleinstein SH, Hayot F, Sealfon SC, Wetmur JG. Coregulation mapping based on individual phenotypic variation in response to virus infection. Immunome Res. 2010; 6:2.
      View in: PubMed
    17. Ge Y, Sealfon SC, Speed TP. Multiple testing and its applications to microarrays. Stat Methods Med Res. 2009 Dec; 18(6):543-63.
      View in: PubMed
    18. Panagis L, Zhao X, Ge Y, Ren L, Mittag TW, Danias J. Gene expression changes in areas of focal loss of retinal ganglion cells in the retina of DBA/2J mice. Invest Ophthalmol Vis Sci. 2010 Apr; 51(4):2024-34.
      View in: PubMed
    19. Sebeo J, Hsiao K, Bozdagi O, Dumitriu D, Ge Y, Zhou Q, Benson DL. Requirement for protein synthesis at developing synapses. J Neurosci. 2009 Aug 5; 29(31):9778-93.
      View in: PubMed
    20. Lin J, Bardina L, Shreffler WG, Andreae DA, Ge Y, Wang J, Bruni FM, Fu Z, Han Y, Sampson HA. Development of a novel peptide microarray for large-scale epitope mapping of food allergens. J Allergy Clin Immunol. 2009 Aug; 124(2):315-22, 322.e1-3.
      View in: PubMed
    21. Wang W, Xu GL, Jia WD, Wang ZH, Li JS, Ma JL, Ge YS. [Prevention of hepatic tumor growth and metastasis in rats with rapamycin]. Zhonghua Gan Zang Bing Za Zhi. 2009 Mar; 17(3):193-7.
      View in: PubMed
    22. Wang W, Jia WD, Xu GL, Wang ZH, Li JS, Ma JL, Ge YS, Xie SX, Yu JH. Antitumoral activity of rapamycin mediated through inhibition of HIF-1alpha and VEGF in hepatocellular carcinoma. Dig Dis Sci. 2009 Oct; 54(10):2128-36.
      View in: PubMed
    23. Mintz CD, Carcea I, McNickle DG, Dickson TC, Ge Y, Salton SR, Benson DL. ERM proteins regulate growth cone responses to Sema3A. J Comp Neurol. 2008 Oct 1; 510(4):351-66.
      View in: PubMed
    24. Phipps-Yonas H, Jiang K, Hartmann BM, Ge Y, Sealfon SC, Moran TM. A comprehensive evaluation of human plasmacytoid dendritic cells using small volumes of human blood. J Interferon Cytokine Res. 2008 Aug; 28(8):501-7.
      View in: PubMed
    25. Ruf F, Hayot F, Park MJ, Ge Y, Lin G, Roysam B, Sealfon SC. Noise propagation and scaling in regulation of gonadotrope biosynthesis. Biophys J. 2007 Dec 15; 93(12):4474-80.
      View in: PubMed
    26. Giordano J, Ge Y, Gelfand Y, Abrusán G, Benson G, Warburton PE. Evolutionary history of mammalian transposons determined by genome-wide defragmentation. PLoS Comput Biol. 2007 Jul; 3(7):e137.
      View in: PubMed
    27. Jin HY, Ding YJ, Liu XF, Yang BL, Lai RS, Ni M, Ge YS. [Screening the hereditary nonpolyposis colorectal cancer by revised Bethesda guideline: a cohort study of 110 cases]. Zhonghua Yi Xue Za Zhi. 2007 Jun 5; 87(21):1445-7.
      View in: PubMed
    28. Jin HY, Lai RS, Ding YJ, Xie L, Yang BL, Liu F, Ding SQ, Ge YS. [Detection of microsatellite instability in colorectal cancer by fluorescence multiplex polymerase chain reaction and its clinical value]. Zhonghua Wei Chang Wai Ke Za Zhi. 2007 May; 10(3):217-20.
      View in: PubMed
    29. Chu TT, Fink MY, Mong JA, John G, Auger AP, Ge Y, Sealfon SC. Effective use of microarrays in neuroendocrine research. J Neuroendocrinol. 2007 Mar; 19(3):145-61.
      View in: PubMed
    30. González-Maeso J, Weisstaub NV, Zhou M, Chan P, Ivic L, Ang R, Lira A, Bradley-Moore M, Ge Y, Zhou Q, Sealfon SC, Gingrich JA. Hallucinogens recruit specific cortical 5-HT(2A) receptor-mediated signaling pathways to affect behavior. Neuron. 2007 Feb 1; 53(3):439-52.
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    31. Ruf F, Park MJ, Hayot F, Lin G, Roysam B, Ge Y, Sealfon SC. Mixed analog/digital gonadotrope biosynthetic response to gonadotropin-releasing hormone. J Biol Chem. 2006 Oct 13; 281(41):30967-78.
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    32. Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 2004; 5(10):R80.
      View in: PubMed
    33. Díaz E, Ge Y, Yang YH, Loh KC, Serafini TA, Okazaki Y, Hayashizaki Y, Speed TP, Ngai J, Scheiffele P. Molecular analysis of gene expression in the developing pontocerebellar projection system. Neuron. 2002 Oct 24; 36(3):417-34.
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    Mount Sinai Profiles is managed by Conduits - The Institutes for Translational Sciences at Icahn School of Medicine, supported by the National Center for Research Resources and the National Center for Advancing Translational Sciences of the National Institutes of Health through Grant Number UL1TR000067